Papers with in-silico predictions
MP-RNA: Unleashing Multi-species RNA Foundation Model via Calibrated Secondary Structure Prediction (2024.findings-emnlp)
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| Challenge: | Experimental evaluations demonstrate that our RNA FM consistently outperforms existing RNA . |
| Approach: | They propose to use filtered high-fidelity structure annotations to enhance the modeling ability of FMs in single nucleotide resolution tasks. |
| Outcome: | The proposed model outperforms existing RNA FMs on four genomic benchmarks and achieves top-tier results on DNA genomic benchmark. |